STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0414Probable ferric siderophore receptor protein. (746 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
  
  
 0.967
RSp0415
Probable extracytoplasmic function sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.743
RSc1811
Putative siderophore synthetase protein.
  
  
 0.726
RSp0642
Probable non ribosomal peptide synthetase protein.
  
  
 0.722
prhA
Outer membrane receptor prha signal peptide protein.
 
  
 0.701
RSc2814
Putative prolyl 4-hydroxylase alpha subunit homologue oxidoreductase protein.
  
  
 0.694
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
 
  
 0.669
prhI
3-compartiment signal transduction system, sigma factor prhi transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.650
RSp1642
Probable transmembrane protein.
 
  
 0.649
RSc2919
Putative iron transport-sensory transduction transmembrane protein.
 
  
 0.588
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.