STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0428Putative pseudogene protein. (54 aa)    
Predicted Functional Partners:
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 
 0.872
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 
 0.871
RSc2258
Probable amino acid transmembrane abc transporter protein.
 
 
 0.870
gltK
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 
 0.868
RSp0934
Probable amino acid transmembrane abc transporter protein.
 
 
 0.868
RSp0480
Probable amino acid transmembrane abc transporter protein.
 
 
 0.867
RSc3409
Probable amino-acid transmembrane abc transporter protein.
 
 
 0.866
RSp1577
Probable amino-acid transmembrane abc transporter protein.
 
 
 0.863
RSc2105
Probable amino-acid transmembrane abc transporter protein.
 
 
 0.862
RSp1576
Probable amino-acid transmembrane abc transporter protein.
 
 
 0.862
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.