STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0432Putative transcriptional activator transcription regulator protein. (226 aa)    
Predicted Functional Partners:
RSp0431
Putative amine oxidase; oxidoreductase protein.
 
     0.929
RSp0433
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.645
RSp0430
Probable alcohol dehydrogenase (adh-ht) oxidoreductase protein.
 
     0.586
rpoE2
Probable rna polymerase sigma-e factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.496
RSc0034
Probable ecf-family rna polymerase sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
rpoE1
Probable rna polymerase sigma-e factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
RSc2078
Probable rna polymerase sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
RSc2361
Probable rna polymerase sigma-e factor sigma-24 homolog transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
RSc2918
Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
RSp0415
Probable extracytoplasmic function sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.495
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.