STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0434Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
RSp0433
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.791
RSp0435
Miscellaneous; hypothetical/partial homology.
       0.773
RSc0542
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.603
RSc2498
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.535
hrcS
Hrp conserved hrcs transmembrane protein.
  
     0.490
RSp0432
Putative transcriptional activator transcription regulator protein.
 
     0.440
RSp1214
Probable cog3644, uncharacterized protein conserved in bacteria.
  
     0.406
RSc2600
Putative substrate-binding domain related to lysr regulator protein.
  
     0.403
RSp0662
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.