STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0436Probable transcription regulator protein. (205 aa)    
Predicted Functional Partners:
RSc2102
Probable transcription regulator protein.
  
  
 0.783
RSp0437
Probable transport transmembrane protein.
       0.516
RSp0438
Probable hydrolase protein.
       0.509
RSc3411
Probable transcription regulator protein.
  
    0.494
RSc1610
Probable transcription regulator protein.
  
    0.492
RSc0302
Probable transcription regulator protein.
  
    0.458
RSc2255
Probable transcription regulator protein.
  
    0.421
ilvH
Probable acetolactate synthase isozyme III (small subunit) protein.
   
    0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.