STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0436Probable transcription regulator protein. (205 aa)    
Predicted Functional Partners:
RSc2102
Probable transcription regulator protein.
  
  
 0.782
RSp0437
Probable transport transmembrane protein.
       0.516
RSp0438
Probable hydrolase protein.
       0.509
RSc3411
Probable transcription regulator protein.
  
  
 0.501
RSc1610
Probable transcription regulator protein.
  
  
 0.499
RSc0302
Probable transcription regulator protein.
  
  
 0.466
RSc2255
Probable transcription regulator protein.
  
  
 0.429
ilvH
Probable acetolactate synthase isozyme III (small subunit) protein.
   
    0.423
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.