STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0438Probable hydrolase protein. (197 aa)    
Predicted Functional Partners:
RSp0437
Probable transport transmembrane protein.
       0.746
RSp0436
Probable transcription regulator protein.
       0.509
nnrD
Putative sugar kinase protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...]
   
    0.491
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.486
maiA
Probable maleate cis-trans isomerase protein; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.483
RSp0911
Putative salicylate hydroxylase oxidoreductase protein.
 
  
 0.480
RSc1823
Hypothetical protein; Small molecule metabolism.
 
 
 
 0.469
RSp0439
Hypothetical protein; Miscellaneous; unknown.
       0.461
efe
2-oxoglutarate-dependent ethylene/succinate-forming enzyme (ethylene-forming enzyme) (efe) protein; Simultaneously catalyzes two reactions, namely formation of ethylene and of succinate from 2-oxoglutarate.
  
     0.438
RSc2328
Putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) signal peptide protein.
  
   0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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