STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0476Putative rhs-related transmembrane protein. (1368 aa)    
Predicted Functional Partners:
RSp0449
Putative rsh-related protein.
 
    0.772
RSp0279
Putative periplasmic component of the tol transport system tolb-related signal peptide protein.
 
  
 0.635
RSp0477
Putative rhs-related transmembrane protein.
 
   
0.630
tolB
Probable protein tolb precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.587
RSp0176
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.502
hrpW
Hrpw transmembrane protein.
  
  
 0.502
RSc1120
Hypothetical transmembrane protein.
  
  
 0.496
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 
 0.470
tig
Probable peptidyl-prolyl cis/trans isomerase (trigger factor) (tf) protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.426
RSp1647
Putative sam (and some other nucleotide) binding protein.
  
  
 0.421
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.