STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0479Probable atp-binding abc transporter protein. (249 aa)    
Predicted Functional Partners:
RSp0480
Probable amino acid transmembrane abc transporter protein.
 0.999
RSp0481
Probable substrate-binding periplasmic (pbp) abc transporter protein; Belongs to the bacterial solute-binding protein 3 family.
 0.993
RSc3409
Probable amino-acid transmembrane abc transporter protein.
 
 0.981
gltK
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 0.954
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
    
0.906
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
     
0.900
RSp1465
Probable abc-type transport system, permease component abc transporter protein.
 
      0.899
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 0.883
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 0.878
RSc2258
Probable amino acid transmembrane abc transporter protein.
 
 0.876
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.