STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
czcAProbable cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1064 aa)    
Predicted Functional Partners:
czcB
Probable cobalt-zinc-cadmium resistance (cation efflux system protein) transmembrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.992
czcC
Probable cobalt-zinc-cadmium outer membrane resistance protein.
 
  
 0.986
RSp0927
Putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.950
RSp0529
Putative cation efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.820
RSp1041
Probable cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.802
RSp0528
Putative outer membrane cation efflux system protein.
 
  
 0.695
RSp0926
Putative outer membrane cation efflux protein.
 
  
 0.681
RSp0490
Putative signal peptide protein.
       0.671
acrA
Probable acriflavin resistance lipoprotein a precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.597
RSp0929
Hypothetical signal peptide protein.
 
  
 0.597
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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