STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfrBProbable inner membrane transmembrane protein. (698 aa)    
Predicted Functional Partners:
RSp0509
Hypothetical signal peptide protein.
 
  
 0.946
RSp0512
Probable papd-like; transmembrane protein.
 
  
 0.823
hmsF
Putative hemin storage signal peptide protein.
  
  
 0.739
RSc3163
Probable tpr domain protein.
  
 
 0.671
RSc3186
Hypothetical protein; Miscellaneous; unknown.
  
 
 0.671
RSp0522
Probable transmembrane protein.
  
 
 0.671
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
  
  
 0.612
epsC2
Probable udp-n-acetylglucosamine 2-epimerase protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.602
RSc1496
Hypothetical protein; Miscellaneous; unknown.
  
 
 0.577
ragE
Probable polysaccharide transport system component transmembrane protein.
  
 
 0.577
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.