STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cog2910Cog2910, putative nadh-flavin reductase / saccharopine dehydrogenase; oxidoreductase protein. (203 aa)    
Predicted Functional Partners:
RSp0526
Probable cog1959, predicted transcriptional regulator protein.
  
 0.928
RSc3178
Hypothetical atpase; protein.
  
    0.732
RSc0151
Putative transmembrane protein.
     0.645
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
    
   0.539
RSc3396
Probable typeIrestriction enzyme m protein.
  
    0.508
RSp0597
Putative 3-demethylubiquinone-9 3-methyltransferase; protein.
   
    0.507
RSc0616
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.506
RSc0210
Putative transcription regulator protein.
  
  
 0.460
RSc0816
Putative cog1733, transcriptional regulator transcription regulator protein.
  
  
 0.460
RSp0317
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.418
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.