STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0570Hypothetical protein; Small molecule metabolism. (222 aa)    
Predicted Functional Partners:
RSp0571
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
     0.987
RSc1682
Probable phage phi-105 orf25-like protein.
 
     0.771
RSc1684
Probable phage phi-c31 gp36-like protein.
 
     0.753
RSc1680
Probable phage phi-105 holin-like protein.
 
    0.749
RSp0576
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.710
RSc0839
Probable bacteriophage-related protein.
 
    0.695
RSc3229
Putative bacteriophage-related protein.
 
    0.692
RSc0853
Probable bacteriophage-related protein.
   
 0.678
RSc0834
Miscellaneous; hypothetical/partial homology.
  
     0.677
RSc3228
Putative bacteriophage-related protein.
     0.662
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.