STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0571Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (82 aa)    
Predicted Functional Partners:
RSp0570
Hypothetical protein; Small molecule metabolism.
     0.987
RSc0853
Probable bacteriophage-related protein.
   
 0.794
RSc0844
Putative dna modification methylase protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.792
RSc1682
Probable phage phi-105 orf25-like protein.
 
     0.771
RSc0839
Probable bacteriophage-related protein.
 
    0.763
RSc3229
Putative bacteriophage-related protein.
 
    0.761
RSc1684
Probable phage phi-c31 gp36-like protein.
 
     0.753
RSc1680
Probable phage phi-105 holin-like protein.
 
    0.751
RSc3213
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.707
RSc3228
Putative bacteriophage-related protein.
     0.691
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.