STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0574Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (62 aa)    
Predicted Functional Partners:
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
      
 0.631
RSc2277
Probable transmembrane protein.
      
 0.631
RSp0769
Putative transmembrane protein.
      
 0.631
RSp1422
Putative peptide synthetase protein.
      
 0.631
RSc0965
Hypothetical protein; Miscellaneous; unknown.
      
 0.550
rhlE1
Probable atp-dependent rna helicase protein; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.
      
 0.548
phbB
Probable acetoacetyl-coa reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.546
RSp0575
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.531
RSp0576
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.418
RSp0577
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.418
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.