STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0589Probable dehydrogenase/reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (276 aa)    
Predicted Functional Partners:
RSp0697
Probable dehydrogenase/reductase oxidoreductase protein.
  
 
   0.718
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.590
RSc3201
Probable pseudogene (dehydrogenase, fragment) protein.
  
 
   0.581
RSp0590
Probable transcription regulator protein.
      0.563
RSc0156
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein.
  
 
   0.555
RSc1806
Probable polyketide synthase protein.
  
 
 0.537
RSp1422
Putative peptide synthetase protein.
 
  
 0.519
RSp0588
Probable transposase fragment protein.
       0.470
RSc1810
Probable polyketide synthase protein.
  
 
 0.416
RSp0587
Putative signal peptide protein.
 
     0.414
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.