STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0596Probable transmembrane protein. (216 aa)    
Predicted Functional Partners:
RSp0595
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
     0.991
gstL
Probable glutathione s-transferase protein.
 
  
   0.576
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.574
RSp1319
Probable cog3832, uncharacterized conserved protein.
  
     0.481
RSp1350
Probable cog3832, uncharacterized conserved protein.
  
     0.481
RSp0263
Putative penicillin-binding protein, transpeptidase fold.
  
   
 0.480
RSp0597
Putative 3-demethylubiquinone-9 3-methyltransferase; protein.
       0.474
RSc1806
Probable polyketide synthase protein.
   
 
 0.448
RSc2567
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.