STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0613Probable transcription regulator protein. (215 aa)    
Predicted Functional Partners:
RSp0702
Putative 2-polyprenyl-6-methoxyphenol hydroxylase and related fad-dependent oxidoreductases oxidoreductase protein.
  
     0.654
RSp0701
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.632
paaC
Probable phenylacetic acid degradation protein.
 
     0.612
paaD
Probable phenylacetic acid degradation protein.
 
     0.574
paaE
Probable ferredoxin reductase protein.
 
  
 0.571
paaA
Probable phenylacetic acid degradation protein.
 
     0.521
paaI
Probable phenylacetic acid degradation protein.
 
     0.518
RSp0703
Putative beta-lactamase-like, zn-dependent hydrolases protein.
  
     0.486
RSp1314
Putative zn-dependent hydrolase protein.
  
     0.473
RSp1345
Putative zn-dependent hydrolases protein.
  
     0.473
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.