STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cobWPutative cobalamin biosynthesis protein. (367 aa)    
Predicted Functional Partners:
cobH
Putative precorrin isomerase transmembrane protein.
 
   
 0.988
cobL
Probable precorrin-6b methylase methyltransferase protein.
 
   
 0.981
cbiJH
Probable bifunctional: precorrin-3 methyltransferase and precorrin-6x reductase oxidoreductase protein.
 
   
 0.960
cbiL
Probable precorrin-2 c20-methyltransferase protein; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
   
 0.907
cobN
Probable cobalamin biosynthesis protein.
 
  
 0.905
cbiG
Putative precorrin methylase protein.
 
   
 0.903
cbiD
Putative cobalt-precorrin-6a synthase [deacetylating]. transmembrane protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.872
cbiF
Probable precorrin-4 c11-methyltransferase protein; Belongs to the precorrin methyltransferase family.
 
   
 0.859
RSp0614
Probable reductase; oxidoreductase protein.
 
   
 0.785
cobB
Probable cobyrinic acid a,c-diamide synthase protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.783
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.