STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxNProbable high affinity nickel transporter transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (357 aa)    
Predicted Functional Partners:
RSp0625
Probable magnesium chelatase (subunits dI protein.
       0.820
cobN
Probable cobalamin biosynthesis protein.
       0.806
RSp0627
Putative ferredoxin protein.
       0.783
mntH1
Putative manganese transport transmembrane protein.
  
   
 0.691
RSc2009
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0246 family.
 
      0.652
rcnA
Putative efflux nickel/cobalt transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
      
 0.625
acpA
Putative acid phosphatase protein.
  
     0.515
RSp0114
Probable transmembrane protein.
  
     0.514
copZ
Probable copper ion-binding protein.
      
 0.478
adhA
Putative propanol-preferring alcohol dehydrogenase oxidoreductase protein.
      
 0.472
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.