STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0637Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (143 aa)    
Predicted Functional Partners:
phnB
Putative glyoxalase/bleomycin resistance protein/dioxygenase.
    0.954
RSp0636
Putative rna polymerase sigma factor containing a tpr repeat domain transcription regulator protein; Belongs to the sigma-70 factor family.
 
     0.935
RSc0107
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    0.854
RSc1113
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.507
RSp0635
Probable acyltransferase transmembrane protein.
       0.481
RSp0597
Putative 3-demethylubiquinone-9 3-methyltransferase; protein.
 
    0.459
RSp1476
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.452
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.