STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0641Probable non ribosomal peptide synthetase protein. (6889 aa)    
Predicted Functional Partners:
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
 0.999
RSc1806
Probable polyketide synthase protein.
 
0.999
RSp0165
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
 
 0.998
RSp0640
Probable decoration of polyketide or non ribosomal peptide protein.
 
 
 0.998
RSp1419
Putative peptide synthase protein.
 
0.997
RSp1422
Putative peptide synthetase protein.
 
 
0.997
RSp0642
Probable non ribosomal peptide synthetase protein.
 
  
0.995
RSc1810
Probable polyketide synthase protein.
 
0.993
RSp0163
Probable phosphopantetheinyl transferase protein; Belongs to the P-Pant transferase superfamily.
 
 0.990
RSp0709
Putative cytochrome p-450-like monooxygenase oxidoreductase protein; Belongs to the cytochrome P450 family.
 
 0.990
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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