STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmsBProbable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; Belongs to the HIBADH-related family. (298 aa)    
Predicted Functional Partners:
RSp0647
Putative enoyl-coenzyme a hydratase protein.
 
 0.992
mmsA
Probable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein.
 
 
 0.984
RSc1298
Probable enoyl(3-hydroxyisobutyryl)-coenzyme a hydratase protein.
  
 0.946
RSp1055
Probable transmembrane aldehyde dehydrogenase oxidoreductase protein.
 
 
 0.929
RSc2536
Putative transmembrane aldehyde dehydrogenase oxidoreductase protein.
 
 
 0.928
RSp0648
Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.927
fbaA
Probable fructose-bisphosphate aldolase protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
  
 0.915
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.912
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.912
RSp1056
Probable beta-alanine--pyruvate aminotransferase (omega-amino acid--pyruvate aminotransferase) protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.909
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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