STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mmsAProbable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein. (515 aa)    
Predicted Functional Partners:
mmsB
Probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; Belongs to the HIBADH-related family.
 
 
 0.984
RSp0651
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein.
  
 0.954
goaG
Probable 4-aminobutyrate aminotransferase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.927
prpC
Probable methylcitrate synthase (citrate synthase 2) protein; Belongs to the citrate synthase family.
  
 0.927
RSc0475
Putative acetyl-coa acyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
RSc1761
Probable acetyl-coa acetyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.923
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.923
RSc0274
Probable acyl coa dehydrogenase oxidoreductase protein.
   
  0.921
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.920
RSc1799
Putative dihydrolipoamide acetyltransferase (component e2 of pyruvate dehydrogenase complex) protein.
   
 
 0.918
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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