STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copSProbable two component sensor histidine kinase transcription regulator protein; Member of a two-component regulatory system. (466 aa)    
Predicted Functional Partners:
copR
Probable two component response regulator transcription regulator protein.
 0.999
czcR
Probable response regulator for cobalt zinc cadmium resistance transcription regulator protein.
 0.996
czcS
Sensor protein; Member of a two-component regulatory system.
  
  
0.933
copB
Probable copper resistance protein b.
 
   
 0.931
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
RSp1442
Probable two-component response regulator transcription regulator protein.
 
 0.824
copA
Probable copper resistance transmembrane protein.
 
 
 0.818
RSp1042
Probable two-component response regulator transcription regulator protein.
 
 0.805
RSp1196
Probable two component response regulator transcription regulator protein.
 
 0.787
RSc0550
Probable response regulator transcription regulator protein.
 
 0.783
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.