STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copAProbable copper resistance transmembrane protein. (605 aa)    
Predicted Functional Partners:
copB
Probable copper resistance protein b.
  
 0.992
copS
Probable two component sensor histidine kinase transcription regulator protein; Member of a two-component regulatory system.
 
 
 0.818
copD
Probable copper resistance d transmembrane protein.
 
   
 0.803
copC
Probable copper resistance c signal peptide protein.
 
   
 0.787
copR
Probable two component response regulator transcription regulator protein.
 
  
 0.680
RSc3084
Probable transmembrane protein.
    
   0.550
RSp1367
Putative cytochrome c5 protein.
    
   0.550
czcS
Sensor protein; Member of a two-component regulatory system.
 
 
 0.547
RSp0641
Probable non ribosomal peptide synthetase protein.
   
  
 0.417
RSc2299
Putative multicopper oxidase, type 2; signal peptide protein.
  
     0.415
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.