STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBProbable copper resistance protein b. (346 aa)    
Predicted Functional Partners:
copA
Probable copper resistance transmembrane protein.
  
 0.996
copC
Probable copper resistance c signal peptide protein.
   
 0.979
copS
Probable two component sensor histidine kinase transcription regulator protein; Member of a two-component regulatory system.
 
   
 0.966
copR
Probable two component response regulator transcription regulator protein.
 
   
 0.935
copD
Probable copper resistance d transmembrane protein.
   
 0.925
RSp1530
Polyphenol oxidase (laccase) oxidoreductase protein.
  
  
 0.870
RSc2299
Putative multicopper oxidase, type 2; signal peptide protein.
 
  
 0.775
RSc2297
Hypothetical signal peptide protein.
  
  
 0.731
RSc2298
Putative multicopper oxidase, type 3; signal peptide protein.
  
  
 0.731
RSp1503
Probable major anaerobically induced outer membrane transmembrane protein; Belongs to the multicopper oxidase family.
  
  
 0.706
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.