STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copCProbable copper resistance c signal peptide protein. (128 aa)    
Predicted Functional Partners:
copD
Probable copper resistance d transmembrane protein.
  
 0.980
copB
Probable copper resistance protein b.
   
 0.979
copS
Probable two component sensor histidine kinase transcription regulator protein; Member of a two-component regulatory system.
 
  
 0.837
RSc0038
Putative transmembrane protein.
  
  
 0.808
copR
Probable two component response regulator transcription regulator protein.
  
  
 0.787
copA
Probable copper resistance transmembrane protein.
 
   
 0.785
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
  
 0.779
RSp1642
Probable transmembrane protein.
 
    0.777
RSp0971
Probable transmembrane protein.
  
     0.685
ctaA
Putative heme o oxygenase (cytochrome aa3-controlling) transmembrane protein.
      
 0.594
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.