STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
copDProbable copper resistance d transmembrane protein. (309 aa)    
Predicted Functional Partners:
copC
Probable copper resistance c signal peptide protein.
  
 0.980
copB
Probable copper resistance protein b.
   
 0.925
copA
Probable copper resistance transmembrane protein.
 
   
 0.804
RSp0971
Probable transmembrane protein.
  
     0.662
RSp0611
Probable transmembrane protein.
  
     0.621
copS
Probable two component sensor histidine kinase transcription regulator protein; Member of a two-component regulatory system.
 
    0.537
RSc1400
Putative transmembrane protein.
  
     0.496
RSc3285
Probable abc-type branched-chain amino acid transport systems, periplasmic component signal peptide protein.
  
     0.483
copR
Probable two component response regulator transcription regulator protein.
  
    0.425
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.