STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0663Probable transport transmembrane protein. (537 aa)    
Predicted Functional Partners:
RSp0664
Probable transcription regulator protein.
 
   
 0.662
RSp0441
Probable inner membrane multidrug resistance transmembrane protein.
  
     0.653
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.487
RSc0216
Probable transport transmembrane protein.
  
     0.438
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
   
 0.432
RSp0665
Probable magnesium and cobalt transport transmembrane protein.
       0.430
tag
Probable dna-3-methyladenine glycosylaseIprotein.
       0.425
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
   
 0.417
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.