STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0673Probable lipoprotein. (227 aa)    
Predicted Functional Partners:
RSp0674
Probable lipoprotein.
    0.994
RSp0675
Probable lipoprotein.
 
    0.969
flgE
Probable flagellar hook protein flge.
   
 
 0.584
flgH
Probable flagellar l-ring protein precursor (basal body l-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
 
 0.584
flgB
Probable flagellar basal-body rod protein flgb; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
   0.567
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
   
   0.567
flgI
Probable flagellar p-ring precursor (basal body p-ring protein). signal peptide; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.564
fliF
Probable flagellar m-ring transmembrane protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
    
 
 0.563
flgF
Probable flagellar basal-body rod protein flgf; Belongs to the flagella basal body rod proteins family.
    
   0.555
flgG
Probable flagellar basal-body rod protein flgg (distal rod protein).
    
   0.555
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.