STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0682Putative histamine dehydrogenase oxidoreductase protein. (726 aa)    
Predicted Functional Partners:
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
  
 
 0.999
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
  
 0.950
RSc2434
Putative reductase oxidoreductase protein.
  
 0.950
RSc2722
Probable ipr002932 ferredoxin-dependent glutamate synthase; signal peptide protein; Belongs to the glutamate synthase family.
  
 
 0.922
eftB
Putative electron transfer flavoprotein beta-subunit.
  
 
 0.910
etfB
Probable electron transfer flavoprotein (beta-subunit).
  
 
 0.901
nuoF
Probable nadh dehydrogenaseI(chain f) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.881
narH
Probable respiratory nitrate reductase oxidoreductase protein.
    
 
 0.879
etfA
Probable electron transfer flavoprotein (alpha-subunit).
  
 
 0.866
eftA
Putative electron transfer flavoprotein alpha-subunit (alpha-etf).
  
 
 0.866
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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