STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0684Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (238 aa)    
Predicted Functional Partners:
RSp0689
Probable negative transcriptional regulator transcription regulator protein.
  
    0.769
RSp0685
Putative tonb box harboring transmembrane protein.
 
     0.673
RSp0683
Putative predicted enzyme with a tim-barrel fold protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.559
trpD2
Probable anthranilate phosphoribosyltransferase 2 protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.542
RSp0682
Putative histamine dehydrogenase oxidoreductase protein.
       0.542
RSp0686
Probable transcription regulator protein.
 
     0.493
RSp1320
Putative dna-binding transcriptional regulatory transcription regulator protein.
 
     0.485
RSp1351
Putative transcription regulator protein.
 
     0.485
RSc0385
Putative lyse-type efflux permease transmembrane protein.
  
    0.482
RSc2024
Probable lyse-type efflux permease transmembrane protein.
  
    0.482
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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