STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RSp0693Putative lactoylglutathione lyase and related lyases protein. (180 aa)    
Predicted Functional Partners:
kynA2
Putative tryptophan-2,3-dioxygenase oxidoreductase protein; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
       0.714
RSp0697
Probable dehydrogenase/reductase oxidoreductase protein.
  
   0.623
RSp0695
Putative dehydrogenases (flavoproteins) signal peptide.
       0.618
icmF
Putative methylmalonyl-coa mutase protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.609
RSp0698
Putative aminotransferase protein.
   
   0.597
RSp0696
Putative aminotransferase, class v; protein.
       0.594
RSc0301
Fumarylacetoacetate (FAA) hydrolase; Putative 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) oxidoreductase protein.
 
   
 0.575
RSp0702
Putative 2-polyprenyl-6-methoxyphenol hydroxylase and related fad-dependent oxidoreductases oxidoreductase protein.
 
   
 0.550
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.529
RSc0391
Probable ferredoxin protein.
  
    0.480
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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