STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0697Probable dehydrogenase/reductase oxidoreductase protein. (263 aa)    
Predicted Functional Partners:
RSp0698
Putative aminotransferase protein.
 
   0.809
RSp0696
Putative aminotransferase, class v; protein.
  
 
 0.794
RSc1763
Probable dehydrogenase oxidoreductase protein.
  
     0.772
idnO
Probable gluconate 5-dehydrogenase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.768
RSc1838
Probable oxidoreductase protein.
  
     0.767
sorD
Probable sorbitol dehydrogenase (l-iditol 2-dehydrogenase) oxidoreductase protein.
  
     0.767
RSc0284
Putative short-chain dehydrogenase/reductase sdr oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.762
RSp0695
Putative dehydrogenases (flavoproteins) signal peptide.
  
   0.760
fabG2
Probable 3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductase.
  
     0.748
RSp1059
Probable dehydrogenase/reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.739
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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