close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0698Putative aminotransferase protein. (374 aa)    
Predicted Functional Partners:
RSp0697
Probable dehydrogenase/reductase oxidoreductase protein.
 
   0.809
RSp0696
Putative aminotransferase, class v; protein.
  
  
 0.762
RSp0695
Putative dehydrogenases (flavoproteins) signal peptide.
     
 0.719
kynA2
Putative tryptophan-2,3-dioxygenase oxidoreductase protein; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
  
 0.640
RSp0693
Putative lactoylglutathione lyase and related lyases protein.
  
   0.604
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.539
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
     
 0.502
RSc1806
Probable polyketide synthase protein.
  
 
 0.437
RSc2329
Putative nad(p)h dehydrogenase (quinone); protein.
   
    0.426
RSc3097
Probable nad(p)h dehydrogenase (quinone); oxidoreductase protein.
   
    0.416
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.