STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RSp0702Putative 2-polyprenyl-6-methoxyphenol hydroxylase and related fad-dependent oxidoreductases oxidoreductase protein. (563 aa)    
Predicted Functional Partners:
RSp0701
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.962
RSp0703
Putative beta-lactamase-like, zn-dependent hydrolases protein.
    0.947
RSp1314
Putative zn-dependent hydrolase protein.
    0.858
RSp1345
Putative zn-dependent hydrolases protein.
    0.858
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
  
 0.665
RSp0613
Probable transcription regulator protein.
  
     0.654
RSp0704
Probable transcription regulator protein.
 
   
 0.560
RSp0693
Putative lactoylglutathione lyase and related lyases protein.
 
   
 0.550
gstB
Probable glutathione s-transferase protein.
 
     0.512
hmgB
Probable fumarylacetoacetase (fumarylacetoacetate hydrolase) protein.
 
  
 0.503
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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