STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0713Putative gcn5-related n-acetyltransferase; protein. (174 aa)    
Predicted Functional Partners:
RSp1627
Hypothetical ribbon-helix-helix motif harboring protein.
   
 
 0.585
RSp0714
Putative d-alanine aminotransferase (d-aspartate aminotransferase) protein.
 
     0.579
RSc0055
Signal peptide protein; Putative dienelactone hydrolase and related enzymes / esterase/lipase/thioesterase;lipase, active site; signal peptide protein.
  
     0.513
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.450
RSc0048
Putative transcription regulator protein; Belongs to the Fur family.
  
     0.446
RSc0745
Putative cog3613, nucleoside 2-deoxyribosyltransferase protein.
  
     0.443
RSc1887
Putative esterase/lipase/thioesterase;acyl-coa thioester hydrolase protein.
  
     0.441
RSp0715
Putative signal peptide protein.
       0.438
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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