STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0719Hypothetical signal peptide protein. (457 aa)    
Predicted Functional Partners:
RSp0720
Probable signal peptide protein.
 
     0.930
RSp0718
Putative cytochrome c peroxidase protein.
 
     0.810
RSc0610
Putative signal peptide protein.
 
     0.797
RSc2288
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.608
RSp0564
Putative lipoprotein.
 
    0.607
RSc3160
Probable two component sensor histidine kinase transcription regulator protein.
  
     0.525
RSc3390
Probable porin signal peptide protein.
 
    0.510
RSp0721
Probable transmembrane protein.
       0.491
RSp1173
Probable cytochrome c peroxidase transmembrane protein.
 
     0.478
acpA
Putative acid phosphatase protein.
  
    0.475
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.