STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0746Hypothetical protein of unknown function duf1316. (157 aa)    
Predicted Functional Partners:
RSp0747
Hypothetical protein of unknown function duf879, bacterial.
  
 0.989
RSp0748
Hypothetical protein of unknown function duf1305.
  
 0.986
RSp0743
Hypothetical uncharacterised conserved protein ucp028301.
 
  
 0.948
RSp0744
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.941
RSp0745
Hypothetical protein of unknown function duf796.
 
  
 0.935
RSp0741
Putative transmembrane protein.
 
  
 0.925
RSp0739
Probable transmembrane protein.
 
  
 0.918
RSp0740
Hypothetical protein of unknown function duf876, bacterial.
 
  
 0.911
RSp0750
Putative vgr-related protein.
 
  
 0.911
RSp0749
Putative clpa/b-type chaperone protein; Belongs to the ClpA/ClpB family.
 
  
 0.907
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.