STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0761Putative outer membrane protein. (277 aa)    
Predicted Functional Partners:
RSp0763
Probable transmembrane protein.
  
 0.979
RSp0762
Miscellaneous; hypothetical/partial homology.
 
  
 0.951
RSp0766
Probable transmembrane protein.
 
     0.877
RSp0765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.822
RSp0741
Putative transmembrane protein.
  
   
 0.727
RSp0739
Probable transmembrane protein.
 
  
 0.699
RSp0764
Probable transmembrane protein.
       0.657
RSp0740
Hypothetical protein of unknown function duf876, bacterial.
  
  
 0.624
RSp0746
Hypothetical protein of unknown function duf1316.
  
  
 0.621
RSp0768
Putative vgr-related protein.
 
   
 0.614
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.