STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0784Probable fatty acid desaturase transmembrane protein. (325 aa)    
Predicted Functional Partners:
RSp0781
Probable cystathionine beta-lyases/cystathionine gamma-synthases protein.
 
     0.925
RSp0786
Probable cog0332, 3-oxoacyl-[acyl-carrier-protein].
 
  
 0.915
RSp0782
Putative trna synthetase-related protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.831
RSp0783
Putative acyl carrier protein-like.
     
 0.777
RSp0785
Hypothetical protein; Miscellaneous; unknown.
       0.773
RSp0789
Miscellaneous; hypothetical/partial homology.
 
     0.721
RSp0791
Putative acyl carrier protein.
 
   
 0.718
RSp0792
Putative fatty acid desaturase transmembrane protein.
 
 
 0.656
RSp0787
Putative amp-dependent synthetase and ligase transmembrane protein.
 
   
 0.571
RSp1026
Probable signal peptide protein.
  
    0.556
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.