STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0786Probable cog0332, 3-oxoacyl-[acyl-carrier-protein]. (308 aa)    
Predicted Functional Partners:
RSp0781
Probable cystathionine beta-lyases/cystathionine gamma-synthases protein.
 
     0.916
RSp0784
Probable fatty acid desaturase transmembrane protein.
 
  
 0.915
RSp0789
Miscellaneous; hypothetical/partial homology.
 
     0.856
RSp0791
Putative acyl carrier protein.
 
 
 0.835
RSp0782
Putative trna synthetase-related protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
    0.834
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.815
RSc1810
Probable polyketide synthase protein.
  
 
 0.802
RSp0783
Putative acyl carrier protein-like.
  
 
 0.792
fabD
Probable malonyl coa-[acyl-carrier-protein] transacylase.
  
  
 0.745
RSp0792
Putative fatty acid desaturase transmembrane protein.
 
   
 0.740
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.