STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0786Probable cog0332, 3-oxoacyl-[acyl-carrier-protein]. (308 aa)    
Predicted Functional Partners:
RSp0781
Probable cystathionine beta-lyases/cystathionine gamma-synthases protein.
 
     0.917
RSp0784
Probable fatty acid desaturase transmembrane protein.
 
  
 0.917
RSp0789
Miscellaneous; hypothetical/partial homology.
 
     0.856
RSp0782
Putative trna synthetase-related protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.830
RSp0791
Putative acyl carrier protein.
 
  
 0.790
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.758
RSc0432
Putative amp-dependent synthetase or ligase protein.
  
 
 0.748
RSp0367
Putative acyl-coenzyme a synthetases/amp-(fatty) acid ligases and c 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
  
 
 0.748
RSp0792
Putative fatty acid desaturase transmembrane protein.
 
   
 0.743
RSp0783
Putative acyl carrier protein-like.
  
  
 0.735
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.