STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0789Miscellaneous; hypothetical/partial homology. (698 aa)    
Predicted Functional Partners:
RSp0791
Putative acyl carrier protein.
 
     0.881
RSp0788
Putative carbamoyltransferase; protein.
 
     0.862
RSp0786
Probable cog0332, 3-oxoacyl-[acyl-carrier-protein].
 
     0.856
RSp0792
Putative fatty acid desaturase transmembrane protein.
 
     0.841
RSp0781
Probable cystathionine beta-lyases/cystathionine gamma-synthases protein.
 
     0.823
RSp0790
Putative predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) protein.
 
     0.777
RSp0784
Probable fatty acid desaturase transmembrane protein.
 
     0.721
RSp0240
Putative glycosidase possibly involved in trehalose metabolism protein.
   
    0.692
RSp0787
Putative amp-dependent synthetase and ligase transmembrane protein.
 
     0.681
RSp0782
Putative trna synthetase-related protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.640
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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