STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0792Putative fatty acid desaturase transmembrane protein. (301 aa)    
Predicted Functional Partners:
RSc2450
Putative stearoyl-coa desaturase oxidoreductase protein.
  
  
 
0.918
RSp0789
Miscellaneous; hypothetical/partial homology.
 
     0.841
RSp0791
Putative acyl carrier protein.
 
   
 0.814
RSp0790
Putative predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) protein.
     
 0.780
RSp0788
Putative carbamoyltransferase; protein.
 
     0.749
RSp0786
Probable cog0332, 3-oxoacyl-[acyl-carrier-protein].
 
   
 0.743
RSc1810
Probable polyketide synthase protein.
  
 
 0.685
RSp0784
Probable fatty acid desaturase transmembrane protein.
 
 
 0.667
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.654
RSc1806
Probable polyketide synthase protein.
   
 
 0.647
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.