STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0803Putative hemagglutinin-related signal peptide protein. (667 aa)    
Predicted Functional Partners:
RSp0279
Putative periplasmic component of the tol transport system tolb-related signal peptide protein.
 
     0.774
RSc0982
Probable transmembrane protein.
  
     0.763
RSp0631
Putative sel1-like repeat; harboring protein.
  
     0.754
folB2
Putative dihydroneopterin aldolase protein.
  
     0.739
folB1
Probable dihydroneopterin aldolase protein.
  
     0.728
RSp0712
Hypothetical protein of unknown function duf1326.
  
     0.692
RSp0630
Putative phospholipase protein.
  
     0.681
RSc3390
Probable porin signal peptide protein.
  
    0.648
RSp0512
Probable papd-like; transmembrane protein.
  
     0.647
RSp1274
Probable transmembrane protein.
  
     0.643
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.