STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0813Putative signal transduction eal-ggdef domains transmembrane protein. (663 aa)    
Predicted Functional Partners:
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
  
  
 0.878
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.856
pilZ
Putative type 4 fimbrial biogenesis protein.
    
   0.849
RSc0588
Probable signal transduction protein eal-ggdef domains.
 
 
0.822
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 0.801
RSc0510
Probable signal transduction eal-ggdef domains transmembrane protein.
 
  
0.778
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.773
RSp0811
Probable tonb-dependent receptor signal peptide protein.
       0.773
RSp0812
Putative transmembrane protein.
       0.773
RSp1155
Probable signal transduction protein eal-ggdef domains.
 
 
0.768
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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