STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0818Probable drug efflux transmembrane protein. (1053 aa)    
Predicted Functional Partners:
RSp0819
Probable drug efflux lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.992
RSp0817
Probable outer membrane drug efflux lipoprotein.
   0.976
acrA
Probable acriflavin resistance lipoprotein a precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.970
mexC
Probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.969
RSp1457
Putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.914
RSp1598
Putative transport transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.885
oprM
Probable outer membrane chanel lipoprotein.
 
   0.862
RSc0009
Probable drug efflux lipoprotein.
 
   0.846
RSp1112
Probable transmembrane multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.830
RSp0442
Probable channel-forming component of a multidrug resistance efflux pump protein.
 
 
 0.748
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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