STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0818Probable drug efflux transmembrane protein. (1053 aa)    
Predicted Functional Partners:
RSp0819
Probable drug efflux lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.996
RSp0817
Probable outer membrane drug efflux lipoprotein.
  0.995
acrA
Probable acriflavin resistance lipoprotein a precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.985
RSc0009
Probable drug efflux lipoprotein.
  0.968
mexC
Probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.968
RSc0695
Probable porin (omp) abc transporter protein.
  
 0.923
RSp0290
Probable typeIsecretion system, outer membrane chanel lipoprotein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.923
mexD
Probable multidrug efflux system transmembrane protein.
  
  
 
0.904
acrB
Putative acriflavin resistance transmembrane protein.
  
  
 
0.902
oprM
Probable outer membrane chanel lipoprotein.
   0.864
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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