STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0819Probable drug efflux lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)    
Predicted Functional Partners:
RSp0818
Probable drug efflux transmembrane protein.
 0.992
acrB
Putative acriflavin resistance transmembrane protein.
 0.970
mexD
Probable multidrug efflux system transmembrane protein.
 0.970
RSp0817
Probable outer membrane drug efflux lipoprotein.
 
 
 0.948
RSp0670
Probable transporter lipoprotein transmembrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
0.862
RSp1458
Probable transporter transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.862
RSp1597
Probable transport transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.861
RSp1113
Probable transmembrane multidrug-efflux system lipoprotein transmembrane.
 
 0.828
RSc0009
Probable drug efflux lipoprotein.
  
 
 0.810
oprM
Probable outer membrane chanel lipoprotein.
  
 
 0.808
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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