STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0824Putative gluconolactonase (d-glucono-delta-lactone lactonohydrolase) protein. (353 aa)    
Predicted Functional Partners:
RSc0771
Putative transmembrane dehydrogenase (large subunit) oxidoreductase protein.
  
 
 0.910
RSc1034
Hypothetical oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.910
RSp0945
Probable dehydrogenase oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.910
gntK
Probable thermoresistant gluconokinase (gluconate kinase 2) protein.
    
 0.908
RSp0946
Putative gluconate kinase protein.
    
 0.908
RSc0049
Probable 3-carboxymuconate cyclase protein.
  
  
 0.652
RSp0183
Probable 3-carboxymuconate cyclase protein.
  
  
 0.645
RSp0823
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
     0.597
RSp0826
Probable 5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (kdgdh) protein; Belongs to the DapA family.
 
     0.503
RSc2755
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.484
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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