STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
garDProbable d-galactarate dehydratase (d-galactarate dehydrogenase) protein. (533 aa)    
Predicted Functional Partners:
gudD2
Probable glucarate dehydratase protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.990
gudD1
Probable glucarate dehydratase protein.
 
 
 0.975
RSp0826
Probable 5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (kdgdh) protein; Belongs to the DapA family.
 
  
 0.953
gudP
Putative glucarate transporter (d-glucarate permease) transmembrane protein.
  
 0.841
pehC
Polygalacturonase transmembrane protein; Belongs to the glycosyl hydrolase 28 family.
 
     0.832
RSp0832
Probable gluconolactonase protein.
 
   
 0.807
RSp0831
Putative nad-dependent epimerase/dehydratase; protein.
 
     0.801
exuT1
Probable hexuronate transporter transmembrane protein.
  
 0.720
pehB
Exo-poly-galacturonosidase signal peptide protein; Belongs to the glycosyl hydrolase 28 family.
 
     0.602
dgoAa
Putative 2-dehydro-3-deoxyphosphogalactonate aldolase protein.
 
  
 0.589
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.